SPANG >> Library >> OMA

SPARQL templates for OMA

   get_ortholog   
    Description: Get orthologs of a specified protein
    (ex. HUMAN22168 OrthologsCluster)

   organism_list   
    Description: List of organisms

   organism_proteome_size   
    Description: List of organisms with proteome size

   organism_search   
    Description: Search organism
    (ex. homo)

   paralog_ratio   
    Description: Ratio of paralogs in a genome (taxid)
    (ex. 7227)

   proteome_size_for_organism   
    Description: Count proteins for organism (taxid)
    (ex. 7227)