UniProt SPARQL endpoint
Select SPARQL template
count_org
Count proteins for each organism
filter_by_go
Filter UniProt IDs by GO annotation
(ex: GO_0045202)
filter_by_go_ancestor
(ex: GO_0045202)
filter_by_go_direct
SELECT ?uniprot ?uniprot_label
(ex: GO_0045202)
function
Function annotation
(ex: K9Z723)
gene
From UniProt ID to gene name
(ex: K9Z723)
go_ratio
Set of UniProt IDs to GO annotations with ratio
info
(ex: K9Z723)
list_disease
list_go
List of GO IDs
list_organism
List of organisms associated with UniProt IDs
list_protein_of_org
(ex: tax:511145)
list_uniprot
List of UniProt IDs
search_disease
(ex: diabetes)
tax2ancestor
TaxID to ancestor
(ex: Phylum)
tax_count_descendants
Count TaxIDs under a given TaxID
(ex: 511145)
tax_uri_ancestors
Taxonomic hierarchy for
(ex: tax:511145)
taxtree_ancestor
Higher taxa of a NCBI taxonomy ID (ordered by taxonomic levels; only for Virtuoso)
(ex: 511145)
uniprot2annot
?organism
uniprot2disease
uniprot2disease_annot
uniprot2go
uniprot2go_count
uniprot2go_count2
uniprot2go_ratio
uniprot2go_ratio2
uniprot_annot
Get UniProt annotations
(ex: P02649)
uniprot_annotation
(ex: K9Z723)
uniprot_disease
(ex: P00918)
uniprot_go
(ex: Q9Y2J0)
uniprot_go_count
uniprot_go_count_all
uniprot_go_ratio
uniprot_xref
Get cross-reference from UniProtID to other database
(ex: PDB)